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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs77548094 chr6:151762554 C/T NEK5 chr13:52607747-52703214:- 0.64 7.51 2.87E-13 Box Plot
THCA rs7755442 chr6:28039015 T/C BTN3A2 chr6:26365387-26378548:+ -0.29 -6.11 2.11E-9 Box Plot
THCA rs77562564 chr10:120885997 GAC/G FAM45B chrX:129628939-129630562:+ 0.2 6.05 2.91E-9 Box Plot
THCA rs7757003 chr6:28307251 G/A ZFP57 chr6:29640169-29648887:- 0.38 6.38 4.12E-10 Box Plot
THCA rs7757064 chr6:116668054 C/A ECSIT chr19:11616731-11639989:- -0.23 -6.12 1.92E-9 Box Plot
THCA rs77601743 chr8:11790569 G/A SGK223 chr8:8175258-8244008:- -0.46 -8.48 2.8E-16 Box Plot
THCA rs77611964 chr6:151739244 A/G NEK5 chr13:52607747-52703214:- 0.49 6.22 1.07E-9 Box Plot
THCA rs77635469 chr2:132205881 T/C CCDC74B chr2:130896860-130902707:- 0.37 6.57 1.29E-10 Box Plot
THCA rs77653504 chr8:9285722 C/T SGK223 chr8:8175258-8244008:- 0.36 6.17 1.46E-9 Box Plot
THCA rs77655536 chr5:18456040 A/T GNB4 chr3:179113877-179169378:- 0.49 6.03 3.34E-9 Box Plot
THCA rs7765920 chr6:26514771 C/T ZNF322B chr9:99957633-99961910:- 0.6 8.79 2.76E-17 Box Plot
THCA rs7765989 chr6:28400295 T/C ZFP57 chr6:29640169-29648887:- 0.44 6.79 3.24E-11 Box Plot
THCA rs7766356 chr6:28400538 T/C BTN3A2 chr6:26365387-26378548:+ -0.35 -7.14 3.45E-12 Box Plot
THCA rs7766356 chr6:28400538 T/C ZFP57 chr6:29640169-29648887:- 0.55 8.03 7.46E-15 Box Plot
THCA rs77666565 chr6:26851415 G/A RNF5P1 chr8:38458179-38458718:- 0.63 5.88 7.83E-9 Box Plot